PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34059-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 130aa    MW: 13765.8 Da    PI: 10.5475
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34059-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.0005231631854
                     HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
              HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                       ++eL  llP  +      + + +eiL  Av ++k L
  TRIUR3_34059-P1 31 PLYAELAALLPGdL-----SRANQVEILDAAVAHLKVL 63
                     5799********55.....89*************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.77E-52574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MAGARRSEQS LAVAGSTRDP GRPQRRRAQF PLYAELAALL PGDLSRANQV EILDAAVAHL  60
KVLSDTAAVL EAYRALQRDA GPVRPAAVEV ASREAVCIAV RAAAARPGAL TRLLEVFDRR  120
GVEVLGVTVT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014758068.14e-30PREDICTED: uncharacterized protein LOC106866780
TrEMBLT1NTA41e-84T1NTA4_TRIUA; Uncharacterized protein
STRINGBRADI4G05760.11e-29(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91411931